MAFSC is headed by the Commandant with rank of Brigadier General. Under the command, there are two main departments that are:
Training Dept. Headed by the Chief Directing Staff (CDS) with the rank of Colonel.
- Directs, supervises and manages all details with regards to CP, the conduct of the course curriculum & evaluation of the course
Training Development Dept. Head of Training Development (HTD) with the rank of Colonel.
- Development, management and evaluation of study materials used by the college